Insertion junction: CLIP2.024900_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024900
Chromosome:chromosome 8
Location:3378616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377800 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGAGGACATGGACGAATCATGCCCGCCATTTGTGGCGCCGTCCGAAG
Internal bar code:CTGGAGGTTTCAGCCGTGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3819
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTCCAACTGCTACCGTG
Suggested primer 2:CGTGTTGGCATGAATGGTGG