Insertion junction: CLIP2.024908_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024908
Chromosome:chromosome 12
Location:5906582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533600 DESI6,DeSI-6 (1 of 6) PF05903 - PPPDE putative peptidase domain (Peptidase_C97); DeSI-type SUMO protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCAGCGACCCATGAGCCCTGCTGGCGGCGGCCTCAAGGAGAGGAGTA
Internal bar code:GGATTCAGGGTGGTCCAAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2151
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GAACGCTCACCCTGAACTCA
Suggested primer 2:TCATCCCTCAACACAACCCG