Insertion junction: CLIP2.024927_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024927
Chromosome:chromosome 3
Location:5684797
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186700 (1 of 7) IPR001606 - ARID DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATATGATCGCACGCACGCTCCCTCCATTGCTTGATCCCGCAGGTGAC
Internal bar code:TCCGTAGTGCTGGTTCTTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2451
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCGTCTAAATGGTGCGC
Suggested primer 2:TGGTGTTCTCAACAGAGGGC