Insertion junction: CLIP2.024931_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024931
Chromosome:chromosome 1
Location:1731872
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009575 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAGGGCATGAGGGTCGCGATGGCGGCGCTGCTTAGCGGCGGCGCCGT
Internal bar code:TCTCTCGTGTTTCGACTATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1957
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTTGTATGGTGGCTGGG
Suggested primer 2:TACCCATACCTGCCCATCCA