Insertion junction: CLIP2.024933_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024933
Chromosome:chromosome 3
Location:872875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146467 TRS31 (1 of 1) IPR007194//IPR016696//IPR024096 - Transport protein particle (TRAPP) component // TRAPP I complex, subunit 5 // NO signalling/Golgi transport ligand-binding domain; Component of TRAPP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCAGACGCAGGCCCACGCGAAGCCGTAGCGGTGGCAGCGCGGACTCC
Internal bar code:GCGTAAGAAACATTTGCCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2058
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCCTTGTGAGACACGAA
Suggested primer 2:TGCTCTGTCAACAGCCTGAG