Insertion junction: CLIP2.024939_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.024939
Chromosome:chromosome 12
Location:8304366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551100 (1 of 1) PTHR36356:SF1 - EXPRESSED PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTAACTCCTGCTCCCGCGCGAACGACTCCCATTTGGACTTGGCGGTCC
Internal bar code:GGTTGGTTCTTCATCAACTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3190
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTCGTCATCAGCCATTC
Suggested primer 2:GCCTTGTCTTTGGCCTGTTG