Insertion junction: CLIP2.024949_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024949
Chromosome:chromosome 1
Location:84910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000550 Putative nucleotide-diphospho-sugar transferase; (1 of 6) PTHR10994//PTHR10994:SF61 - RETICULON // RETICULON-LIKE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCACCCCTACCCCCACCACAGCCCCAGGCAGCAGCAGCAGCAGCAGCA
Internal bar code:GTCCGGCCTTGCACAACCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:503
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGTGTGTACAGAGCCAG
Suggested primer 2:TCATGTCCGCACTGTACGAG