Insertion junction: CLIP2.024950_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024950
Chromosome:chromosome 1
Location:5826363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041752 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGGTACGGTATGAGGGCAGTCGCATTTTCAAGCAAGGGGAGGCACTAG
Internal bar code:GGGTCCGCCTGTGGCCTGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3712
LEAP-Seq percent confirming:98.5075
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCACAGTAACTACCGGC
Suggested primer 2:CCCTTGTCAGCAGTTCGGAT