Insertion junction: CLIP2.024958_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024958
Chromosome:chromosome 3
Location:6711899
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195900 (1 of 7) PTHR11584//PTHR11584:SF381 - SERINE/THREONINE PROTEIN KINASE // PROTEIN PQN-80, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGCGAGCCGGGCCACCTGGTCATGTCGGTGTTCGAGCCGGCGCCGCC
Internal bar code:CCTGAGATAACGGTCTTAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4170
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCTTCTCGTTCCCCCAT
Suggested primer 2:TAAATGACCACGTCTGGCCC