Insertion junction: CLIP2.024975_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024975
Chromosome:chromosome 10
Location:1169392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425750 (1 of 1) PTHR11227:SF18 - WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATCCTGAAGTGAAGGCGTAGCCAGGTACAGTAATACAGTAGACGAGTT
Internal bar code:TCTTAAAGATCTATATTCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:171
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCCACCTCTCACCACAC
Suggested primer 2:GCTTCCAACTGTCTCTCCCC