Insertion junction: CLIP2.024982_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024982
Chromosome:chromosome 12
Location:9511945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540350 RCD2 Rcd1-like protein; (1 of 2) K12606 - CCR4-NOT transcription complex subunit 9 (RCD1, CNOT9, CAF40) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAACGGCGCGAGACGTTTCCGGACCTGGCCTGCTACCTCTGGCACAGC
Internal bar code:ACGGCTCGCTTCGATATTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1529
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGAGGAAGACGGGGAGGT
Suggested primer 2:AAGCACAGCCACTAGGACAC