Insertion junction: CLIP2.024998_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024998
Chromosome:chromosome 8
Location:3199575
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376720 CEP7 Cysteine endopeptidase; (1 of 5) 3.4.22.33 - Fruit bromelain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCCGCGAGGGTGGCCTCCAGGGGCCACAGCAGGTCATGGGGGATTGT
Internal bar code:GTGCTTAATTATATGGGTACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5234
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCGTTAGTGTGGGAAGG
Suggested primer 2:ACTGCTGACGCACACACATA