Insertion junction: CLIP2.024999_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.024999
Chromosome:chromosome 10
Location:4079639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448150 (1 of 6) PF01847 - von Hippel-Lindau disease tumour suppressor protein (VHL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTATGCTTGCGTGGTTGCGCTGCGTCCATGGCGCCGCGCGTTGCAGG
Internal bar code:GAGAATCTTTCATTCAGGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1950
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCTGTTCGGGCGTCATT
Suggested primer 2:CTCAACTTGCAGGGTCGACT