Insertion junction: CLIP2.025008_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025008
Chromosome:chromosome 11
Location:2574187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095091 (1 of 1) PTHR10108//PTHR10108:SF795 - METHYLTRANSFERASE // CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCTGGGGGAGAGGCACTTGCGTTTGTAGCACTGGAACAAATAACCGC
Internal bar code:TGGTGGTATAACAAGGGCTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2533
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGCTTGGAATAACGGCG
Suggested primer 2:GACGCCATCCATCAGGTAGG