Insertion junction: CLIP2.025011_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025011
Chromosome:chromosome 9
Location:3627865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396957 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGGCGCTCGCTGCCACCCCCGACCACAGCGCCCCAGTCACCTCAGCA
Internal bar code:AACGTAATAAAGCTTGATGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1298
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTGTATGTGGCATGGCA
Suggested primer 2:GCAACCCGCCAGAAATTCTG