Insertion junction: CLIP2.025015_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025015
Chromosome:chromosome 12
Location:8513016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549400 (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCTGGTCGGTGCCCCGTGGCGGCGGTCCCCTTGCTGCGGTCTAAGAAG
Internal bar code:GGTCTGAATTGTTGGAGGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:163
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTAAGGAGAGACAGGGT
Suggested primer 2:CAAGAACTCTGTCGGCGTCT