Insertion junction: CLIP2.025019_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025019
Chromosome:chromosome 7
Location:3710740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337850 (1 of 10) IPR005828//IPR020846 - Major facilitator, sugar transporter-like // Major facilitator superfamily domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACACGGCCCACGGCGTTGAGGAGCCCGAAGCCGGAGGAGCGCAGCTG
Internal bar code:AGTAGTTTATTAGGGATATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:450
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTGCAAAGATTGGCACA
Suggested primer 2:GTGTGTACGTGTATGTGCGC