Insertion junction: CLIP2.025032_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025032
Chromosome:chromosome 8
Location:4005332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382590 (1 of 1) K11662 - actin-related protein 6 (ACTR6, ARP6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGGGGCTCGGCCATGGGTCTCGTGCCGGCTCACACTCTTGCACAGGC
Internal bar code:CTATAGGCAATAGCTCACGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1750
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGAAAGCCCCGGTTACA
Suggested primer 2:GGGAGGGAGGGGATTACAGT