Insertion junction: CLIP2.025036_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025036
Chromosome:chromosome 3
Location:3377475
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166450 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTATCCCGCCCAGTTTCACCCTGCCCATAACCCACTCACCCGCCGCTCG
Internal bar code:TAGATTCTCGTCTCGGTTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2315
LEAP-Seq percent confirming:81.4815
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCAGGGCTACAGGAATT
Suggested primer 2:TCCACGTCAGCGAGGTAGTA