Insertion junction: CLIP2.025044_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025044
Chromosome:chromosome 16
Location:7608747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684715 DCL2 Dicer-like protein; (1 of 4) 3.1.26.3 - Ribonuclease III / RNase III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCTTGGGCCGTGAGGCGTGTGCGGAGATGCAGCCGCTGCGGTCCACA
Internal bar code:ATTATTATTTACGTGTTCCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:261
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGTGGGGAACGTTTGTG
Suggested primer 2:CGGAGGTTGTGATGAGGAGG