Insertion junction: CLIP2.025052_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025052
Chromosome:chromosome 1
Location:3721721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800070 (1 of 1) PF08482 - ATP-dependent helicase C-terminal (HrpB_C) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCAGGAGGTGTTTGGCCTGCCTGACACGCCTCGCCTGGCGGGCGGCC
Internal bar code:CAGTTGGGCCTCATAAGAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1595
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCTTGGTCATCCGGGTC
Suggested primer 2:TCCTTTTCACGGAGTTCGGG