Insertion junction: CLIP2.025056_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025056
Chromosome:chromosome 10
Location:946020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g424500 CPK4 (1 of 1) K00852 - ribokinase (rbsK, RBKS); putative carbohydrate kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGTTGGATCCTGGGTTGGTCGTGCAGCTCGGCATGGTGGTGTGAGTAA
Internal bar code:GGCATCGAAGTGTCCTATGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:661
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCAACGAGGTGAAGGAA
Suggested primer 2:CTGGCTTCCCGACCTTCTTT