Insertion junction: CLIP2.025059_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025059
Chromosome:chromosome 12
Location:2854657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g503150 (1 of 2) K17680 - twinkle protein [EC:3.6.4.12] (PEO1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGGGAGGC
Internal bar code:GCGCCTGTGTGATGGGGTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2086
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTGCGCTGCAGATCATC
Suggested primer 2:CGCTGATGTACTCGGTCTCC