Insertion junction: CLIP2.025068_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025068
Chromosome:chromosome 13
Location:3437967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587100 PCYA1,PCYA Phycocyanobilin ferredoxin oxidoreductase-like protein; (1 of 1) 1.3.7.5 - Phycocyanobilin:ferredoxin oxidoreductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGATGGCTATGACCTATGGCCATGACTGGAGGCTGGGTTGGCTGAGT
Internal bar code:CCTTACACAGAGTACTCGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2920
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACACACATGCACACGTT
Suggested primer 2:CCCCTCAACACCTTCATCCC