Insertion junction: CLIP2.025069_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.025069
Chromosome:chromosome 17
Location:467510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699000 PAT1 Phosphate acetyltransferase; (1 of 2) 2.3.1.8 - Phosphate acetyltransferase / Phosphotransacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGTTGGTGGAGTGTCCGGCTGTGCAAGGCATTGCGGGTGTTGTGGCGC
Internal bar code:TATTGACATCCGTCAGGATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:820
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCGGCTCTTTTGCTTTTG
Suggested primer 2:TTGTGTAGGATTGTGGGGGC