Insertion junction: CLIP2.025070_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025070
Chromosome:chromosome 17
Location:3905515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727801 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTGGCGCGGGAGGCGAGGGCGCCAGCTGCGCGGCTGAGGGGGGAGCG
Internal bar code:CCAGGATTAGATCGAGGGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:457
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTATCTGCCGCCTCCCTTAC
Suggested primer 2:CGGAGATACTGGTGTCGGTG