Insertion junction: CLIP2.025072_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025072
Chromosome:chromosome 6
Location:4323244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278265 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGCGCGCAACAGCAGGCTCGAACACAAGGGCCTGGGGACACAACGGC
Internal bar code:GGAACATCAGAGCCCTCAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3947
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTTGTTCGATATTGGCC
Suggested primer 2:TACCGTACGTGTTGTGGGTG