Insertion junction: CLIP2.025074_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025074
Chromosome:chromosome 7
Location:5066922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347800 SMM29 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) PTHR14614:SF30 - S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTAAGAAAACAAGAGGCCGGGGGCCCGAGCGTGTGGGTGCGGAGCGA
Internal bar code:AGAATTTTCGGACCAGATACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1461
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCGTCGCAAACAGTTTCA
Suggested primer 2:AGCAACAGTCCCAGATGTCG