Insertion junction: CLIP2.025102_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025102
Chromosome:chromosome 2
Location:921899
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079100 XPA1 DNA repair protein; (1 of 1) K10847 - DNA-repair protein complementing XP-A cells (XPA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCTAAAACCCTGGTCCCAAGTCCAACCCAAGACCCTTACCCTCATAC
Internal bar code:CGGTGTACTGGTGGCTGGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:385
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACTGCGAAGGACCTGCA
Suggested primer 2:GGCAGCACACAACGTCAAAT