Insertion junction: CLIP2.025107_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025107
Chromosome:chromosome 17
Location:883937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702451 HLM27 putative N-methyltransferase; (1 of 1) PTHR22884:SF348 - PROTEIN SET-25 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCGTTCCCCCATTGGATGTACAAGCCCATCAGTTGAAGTGTCCCGTG
Internal bar code:CGTCCGCTAATAATGCTTGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1739
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTTTGTCCTCACTCGCC
Suggested primer 2:AACCCGCTCATCCTCTGTTG