Insertion junction: CLIP2.025109_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025109
Chromosome:chromosome 11
Location:587527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467608 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGAGTGAAATGGTGGCATTGATTGCGGCGGATGGTATGGGAGGAAGA
Internal bar code:AGCCCATCATGCATGGCACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1143
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAATGGTGAAGCCCACGC
Suggested primer 2:CCCTCGACCGTTCACTTTCA