Insertion junction: CLIP2.025116_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025116
Chromosome:chromosome 9
Location:6067204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412750 (1 of 1) K06228 - fused (FU) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAACAAAACGTTTGTGTGGTAGAAAGGGGGGCATTAGGATGACCGACAC
Internal bar code:ACGGGGGGACGATATATAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:388
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTTAAACGGGGTGGGAG
Suggested primer 2:ATGACACCCTCCAGCATGTG