Insertion junction: CLIP2.025122_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025122
Chromosome:chromosome 11
Location:3129778
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475550 UMM10 (1 of 2) 2.1.1.165 - Methyl halide transferase / Methyl chloride transferase; methyl-halide synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCCTGCCCCCATTGTCTACAACTGAGCATTCCCCGCGCCACGCACCT
Internal bar code:TATAGAGAGCTAGGTTACGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1386
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTGACGTTTCTGAGGAC
Suggested primer 2:GACTGTTTGCAATGCGTGGT