Insertion junction: CLIP2.025134_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025134
Chromosome:chromosome 11
Location:2192660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467727 (1 of 1) IPR000104//IPR002711//IPR003615//IPR004919 - Antifreeze protein, type I // HNH endonuclease // HNH nuclease // Domain of unknown function DUF262 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAGCCCTCCTGTGGCGGGAGTGGATTCGGATGCATGTGACCATACCC
Internal bar code:TTTTCTAGATTGAGGGGACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2947
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAGCCGGAGTGAGTTTT
Suggested primer 2:CAAGTCACCACTGTTGCAGC