Insertion junction: CLIP2.025135_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025135
Chromosome:chromosome 12
Location:5909961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533650 (1 of 1) PTHR13439//PTHR13439:SF0 - CT120 PROTEIN // BCDNA.GH12326 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCAGGAACCGGCCCACGCACGGTGCAGCGGGGCCGGCCGGGTGGAGGA
Internal bar code:CAAAAGACGGCCTCGGCGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1801
LEAP-Seq percent confirming:79.5918
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGAGCGTTTGGGGACAT
Suggested primer 2:GGTGCACAAAGGTTGTCGAC