Insertion junction: CLIP2.025137_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025137
Chromosome:chromosome 2
Location:1598943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085000 (1 of 1) PTHR22847//PTHR22847:SF423 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCTGCATCCGCATCGGACGCCGAGGCGCCCGCCACCTCCGCCGGCC
Internal bar code:TTACAGGTTTACGAGCCGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2000
LEAP-Seq percent confirming:59.2593
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCGTAGTCTGGTTGAGG
Suggested primer 2:CAGTCTGAGGACGAGGAGGA