Insertion junction: CLIP2.025137_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025137
Chromosome:chromosome 2
Location:1598968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085000 (1 of 1) PTHR22847//PTHR22847:SF423 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTCCGATGCGGATGCAGAGGCAGTCCTGCGGCCGGAGGCGTACAAAG
Internal bar code:TTACAGGTTTACGAGCCGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1770
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCTGAGGACGAGGAGGA
Suggested primer 2:CTGCCGTAGTCTGGTTGAGG