Insertion junction: CLIP2.025138_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025138
Chromosome:chromosome 13
Location:3909199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589870 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGCAGTGCTGGGCTCAATGGTGGACTAGTGCGAAACAGCAGTCAACA
Internal bar code:TCGACGTGACTCAAACAACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3492
LEAP-Seq percent confirming:51.4286
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTACACTCCCGTAGATGC
Suggested primer 2:CAAAGCCTTCCATGTGTGGC