Insertion junction: CLIP2.025145_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025145
Chromosome:chromosome 8
Location:2332855
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g371052 IRE1 (1 of 1) PTHR12506//PTHR12506:SF25//PTHR13954//PTHR13954:SF6 - PROTEIN PHOSPHATASE RELATED // SUBFAMILY NOT NAMED // IRE1-RELATED // SERINE/THREONINE-PROTEIN KINASE/ENDORIBONUCLEASE IRE1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGACGGGGGTTGCATGGATTGGTACAGAGAAGTGTAGCGAGGTAGACA
Internal bar code:GGATGGTGCTTTGGTGGTTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:267
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCAACGCACTTTCTTCC
Suggested primer 2:TCACGGCACACAACCATACA