Insertion junction: CLIP2.025148_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025148
Chromosome:chromosome 17
Location:5208993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g737084 (1 of 1) PTHR15863//PTHR15863:SF2 - FAMILY NOT NAMED // UPF0544 PROTEIN C5ORF45 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCAACTCTGGCAAGGACATACGCCTCCACGTTCAGCGGCTCAACATG
Internal bar code:GCGGTCAGCAAGAGGGTTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2753
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GACACTCCACCCTTACCGTG
Suggested primer 2:GCAGCCCCCATGGATATCTC