Insertion junction: CLIP2.025150_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025150
Chromosome:chromosome 3
Location:4373225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174900 (1 of 5) PF00536 - SAM domain (Sterile alpha motif) (SAM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGCAGGCGGCCGGCCCCGCGCAGCAGGCAGCGTGGCCGGGCGCGCT
Internal bar code:AGACCTTGGCATCGCTTGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5625
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AAATAGACCATGCGCCACCA
Suggested primer 2:CGTAGTCATCGCCGTCGTAA