Insertion junction: CLIP2.025152_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025152
Chromosome:chromosome 4
Location:2941908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224700 NRT1 (1 of 1) K14638 - solute carrier family 15 (peptide/histidine transporter), member 3/4 (SLC15A3_4, PHT); Nitrate transporter NRT1 family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCACCCCCTCTTTCACTGGGCTCGGGCACATAGCCCCTCCCCTCCCCT
Internal bar code:GGAATCCTATGATCCTCCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:51
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTTACCCGGTCACCCTA
Suggested primer 2:GCACAGCAGATAGGCATTGC