Insertion junction: CLIP2.025153_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025153
Chromosome:chromosome 3
Location:1036379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148201 (1 of 10) IPR013781 - Glycoside hydrolase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCTGACACCTTCTCCGCGCTTCCTTGCGGCCATGCATGGCTGCATTC
Internal bar code:GGTAACTCCATGTCTTATGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2325
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTACTCCCAGCGATTCGGTC
Suggested primer 2:CCTTCCTTGTGCCCAGGTAG