Insertion junction: CLIP2.025171_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025171
Chromosome:chromosome 12
Location:3649097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513400 EBG1 Endo-1%252C3(4)-beta-glucanase; (1 of 1) 3.2.1.6 - Endo-1,3(4)-beta-glucanase / Laminarinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCCTTAGGCATCTTACAAAGCTGGTTCTCGCTAACGCTACACGCCCG
Internal bar code:TTATTTATAGGCATTCTGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4687
LEAP-Seq percent confirming:65.5172
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTCGGAAGAAGGAAAGG
Suggested primer 2:GGGTTGTGATGCGGCATTTT