Insertion junction: CLIP2.025173_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025173
Chromosome:chromosome 10
Location:1305327
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427200 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAATCATCCGGCAACCCAAACCCAAAGGTGCTGCGGCGGCAGCTGCTGC
Internal bar code:AACGGATGTAGACTTTCTCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1375
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACAAAGCCGGCCTTTCA
Suggested primer 2:GACGTGCACATCATGGCATC