Insertion junction: CLIP2.025176_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025176
Chromosome:chromosome 3
Location:4402215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175050 TRP13 Transient receptor potential ion channel protein; (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATGCATGCAGGGAGCTCGGCCAGAAGCTGCGGAGGCTGGCTGCCTGC
Internal bar code:CTTTTAGATACTGAGTAGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:695
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACACACATGCATGCA
Suggested primer 2:CCGGCGCAGTTAGGTATGAT