Insertion junction: CLIP2.025194_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025194
Chromosome:chromosome 16
Location:3762860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684861 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTAGCTGCAGTGCCTGCTGCAGCCTCTGCTCCTGCTCCGGGCCCTGCC
Internal bar code:ACGGGGCGTGACGTGACACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1352
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCCTCCTACGAAGTCCG
Suggested primer 2:TTCAGACCTCGCTGCAACAT