Insertion junction: CLIP2.025199_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025199
Chromosome:chromosome 9
Location:5580291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409700 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCCACACTGCTGTCCGAACCCACTCACCTCGCCCACCACCTCGCCC
Internal bar code:CCATGCGGCAGAATATCTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:810
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCCCATCCGCTGGTTTAA
Suggested primer 2:GCCCTAACCCCTAACACACC