Insertion junction: CLIP2.025201_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025201
Chromosome:chromosome 2
Location:6640647
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00129454

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCCCCAGCCTACGGTTACCACCACCCGCCGCCGGGCGCGCCGCCGCC
Internal bar code:GGCAAGCTTACGTACTAGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2014
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCGCAGAGTAGCATACAT
Suggested primer 2:GATAGCTGTGTGTCGGTGCT