Insertion junction: CLIP2.025217_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025217
Chromosome:chromosome 17
Location:2125960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711700 HTA5,HTA30 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGGCAAGAAGGCTGTGAGCCGCAGCGCCAAGGCCGGCCTGCAGTTCC
Internal bar code:AGGATAATAATAGTAGGGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2949
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GAAACCTCACCCCTACACCG
Suggested primer 2:GTATGCGTCAATGCGTCACC